The Annenberg Institute for School Reform Center for Education Organizing
http://annenberginstitute.org/project/center-education-organizing

The NYC Coalition for Educational Justice
http://www.nyccej.org/category/publications

MN Neighborhoods Organizing for Change
http://www.mnnoc.org/noc_reports

Education for Liberation
www.edliberation.org
- the site features free resources and by signing up for the listserve you get info about organizing activities and resources around the country

Free Minds Free People
www.fmfp.org

Youth in Control was founded in NYC as a collaboration between students and youth development workers in the wake of the Occupy movement. The core organizations are El Puente, The Brotherhood/Sister Sol and Urban Art Beat.
http://www.facebook.com/YouthInControl718
Also see StudentActivistUnited@gmail.com